James Nokes/Wellcome Open Res

Assessment of gestational age at antenatal care visits among Kenyan women to inform delivery of a maternal respiratory syncytial virus (RSV) vaccine in low- and middle-income countries.Nyiro, J. U. Nyawanda, B. O. Bukusi, E. Mureithi, M. W. Murunga, N. Nokes, D. J. Bigogo, G. Otieno, N. A. Opere, V. A. Ouma, A. Pecenka, C. Munywoki, P. K.
Wellcome Open Res, (2023). 8:154

Revealing the extent of the first wave of the COVID-19 pandemic in Kenya based on serological and PCR-test data.Ojal, J. Brand, S. P. C. Were, V. Okiro, E. A. Kombe, I. K. Mburu, C. Aziza, R. Ogero, M. Agweyu, A. Warimwe, G. M. Uyoga, S. Adetifa, I. M. O. Scott, J. A. G. Otieno, E. Ochola-Oyier, L. I. Agoti, C. N. Kasera, K. Amoth, P. Mwangangi, M. Aman, R. Ng'ang'a, W. Tsofa, B. Bejon, P. Barasa, E. Keeling, M. J. Nokes, D. J.
Wellcome Open Res, (2022). 6:127

Epidemiology of COVID-19 infections on routine polymerase chain reaction (PCR) and serology testing in Coastal Kenya.Nyagwange, J. Ndwiga, L. Muteru, K. Wamae, K. Tuju, J. Testing Team, C. Kutima, B. Gitonga, J. Karanja, H. Mugo, D. Kasera, K. Amoth, P. Murunga, N. Babu, L. Otieno, E. Githinji, G. Nokes, D. J. Tsofa, B. Orindi, B. Barasa, E. Warimwe, G. Agoti, C. N. Bejon, P. Ochola-Oyier, L. I.
Wellcome Open Res, (2022). 7:69

Efficiency of transplacental transfer of respiratory syncytial virus (RSV) specific antibodies among pregnant women in Kenya.Nyiro, J. U. Bukusi, E. Mwaengo, D. Nyaguara, A. Nyawanda, B. Otieno, N. Bigogo, G. Murunga, N. Widdowson, M. A. Verani, J. R. Chaves, S. S. Mwangudza, H. Odundo, C. Berkley, J. A. Nokes, D. J. Munywoki, P. K.
Wellcome Open Res, (2022). 7:43

Whole genome sequencing of two human rhinovirus A types (A101 and A15) detected in Kenya, 2016-2018.Luka, M. M. Kamau, E. de Laurent, Z. R. Morobe, J. M. Alii, L. K. Nokes, D. J. Agoti, C. N.
Wellcome Open Res, (2021). 6:178

Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya.Adema, I. W. Kamau, E. Uchi Nyiro, J. Otieno, G. P. Lewa, C. Munywoki, P. K. Nokes, D. J.
Wellcome Open Res, (2020). 5:63

Surveillance of endemic human coronaviruses (HCoV-NL63, OC43 and 229E) associated with childhood pneumonia in Kilifi, Kenya.Otieno, G. P. Murunga, N. Agoti, C. N. Gallagher, K. E. Awori, J. O. Nokes, D. J.
Wellcome Open Res, (2020). 5:150

Accuracy of diagnostic tests for respiratory syncytial virus infection within a paediatric hospital population in Kilifi County, Kenya.Mweu, M. M. Murunga, N. Otieno, J. W. Nokes, D. J.
Wellcome Open Res, (2020). 5:155

Study design and protocol for investigating social network patterns in rural and urban schools and households in a coastal setting in Kenya using wearable proximity sensors.Kiti, M. C. Melegaro, A. Cattuto, C. Nokes, D. J.
Wellcome Open Res, (2019). 4:84

Agreement between ELISA and plaque reduction neutralisation assay in Detection of respiratory syncytial virus specific antibodies in a birth Cohort from Kilifi, coastal Kenya.Nyiro, J. U. Kiyuka, P. K. Mutunga, M. N. Sande, C. J. Munywoki, P. K. Scott, J. A. G. Nokes, D. J.
Wellcome Open Res, (2019). 4:33

Molecular characterization of rotavirus group A strains circulating prior to vaccine introduction in rural coastal Kenya, 2002-2013.Owor, B. E. Mwanga, M. J. Njeru, R. Mugo, R. Ngama, M. Otieno, G. P. Nokes, D. J. Agoti, C. N.
Wellcome Open Res, (2018). 3:150

Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance.Morobe, J. M. Nyiro, J. U. Brand, S. Kamau, E. Gicheru, E. Eyase, F. Otieno, G. P. Munywoki, P. K. Agoti, C. N. Nokes, D. J.
Wellcome Open Res, (2018). 3:128

Evaluating the performance of tools used to call minority variants from whole genome short-read data.Said Mohammed, K. Kibinge, N. Prins, P. Agoti, C. N. Cotten, M. Nokes, D. J. Brand, S. Githinji, G.
Wellcome Open Res, (2018). 3:21

Surveillance of respiratory viruses in the outpatient setting in rural coastal Kenya: baseline epidemiological observations.Nyiro, J. U. Munywoki, P. Kamau, E. Agoti, C. Gichuki, A. Etyang, T. Otieno, G. Nokes, D. J.
Wellcome Open Res, (2018). 3:89

Quantification and determinants of the amount of respiratory syncytial virus (RSV) shed using real time PCR data from a longitudinal household study.Wathuo, M. Medley, G. F. Nokes, D. J. Munywoki, P. K.
Wellcome Open Res, (2016). 1:27