0709 203000 - Nairobi 0709 983000 - Kilifi
0709 203000 - NRB 0709 983000 - Kilifi
0709 203000 - NRB | 0709 983000 - Kilifi

Abstract

New SARS-CoV-2 Omicron Variant with Spike Protein Mutation Y451H, Kilifi, Kenya, March-May 2023

Mwanga, M. J. Lambisia, A. W. Morobe, J. M. Murunga, N. Moraa, E. Ndwiga, L. Cheruiyot, R. Musyoki, J. Mutunga, M. Guzman-Rincon, L. M. Sande, C. Mwangangi, J. Bejon, P. Ochola-Oyier, L. I. Nokes, D. J. Agoti, C. N. Nyiro, J. Githinji, G.
Emerg Infect Dis. 2023; 292376-2379

Permanent descriptor
https://doi.org/10.3201/eid2911.230894

We report a newly emerged SARS-CoV-2 Omicron subvariant FY.4 that has mutations Y451H in spike and P42L in open reading frame 3a proteins. FY.4 emergence coincided with increased SARS-CoV-2 cases in coastal Kenya during April-May 2023. Continued SARS-CoV-2 genomic surveillance is needed to identify new lineages to inform COVID-19 outbreak prevention.